Multi-Omics

1. Review

2021 Systems Med - Multiple Omics Data Integration
✨2019 Nature Reviews - Current and future perspectives of liquid biopsies in genomics-driven oncology
✨2017 Genome Biology - Multi-omics approaches to disease
2017 Trend in Genetics - Single-Cell Multiomics: Multiple Measurements from Single Cells
2014 Nature Reviews - Principles and methods of integrative genomic analyses in cancer

2021 Nature Commn - An integrated multi-omics analysis identifies prognostic molecular subtypes of non-muscle-invasive bladder cancer
2020 Cell - Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer
2020 Nature - PCAWG - Genomic basis for RNA alterations in cancer
2020 Nature Medicine - Whole genome, transcriptome and methylome profiling enhances actionable target discovery in high-risk pediatric cancer.
2018 Science - Comprehensive functional genomic resource and integrative model for the human brain
✨ 2018 Science - Single-cell multiomics sequencing and analyses of human colorectal cancer
2015 Nature - Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease
2014 NMETH - Annotation of loci from genome-wide association studies using tissue-specific quantitative interaction proteomics

✨ 2021 Bioinformatics - Subtype-GAN: a deep learning approach for integrative cancer subtyping of multi-omics data
2020 Bioinformatics - Varmole: A biologically drop-connect deep neural network model for prioritizing disease risk variants and genes
2019 Bioinformatics - DIABLO: an integrative approach for identifying key molecular drivers from multi-omics assays
✨ 2019 Bioinformatics - Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy.
2018 Clinical Cancer Research - Deep Learning–Based Multi-Omics Integration Robustly Predicts Survival in Liver Cancer

✨ 2021 Brief Bioinfo - A comparative study of multi-omics integration tools
✨ 2017 PLoS computational biology - mixOmics: An R package for ‘omics feature selection and multiple data integration